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For the sequence below:
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*Create DNA
 +
*Annotate promoter (-10/-35 sequences)
 +
*Analyze rho independent terminator (ARNold)
 +
*Annotate operator (ttgtgagcggataacaa)
 +
*Analyze RNA 5’ UTR structure (NUPACK)
 +
*Annotate 5’ UTR/3’ UTR
 +
*Locate RBS
 +
*Locate Start/stop codons
 +
ILocate ORF
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pT7lacO-GFP sequence
 
pT7lacO-GFP sequence
* https://benchling.com/s/seq-NlmhOd0p27Kd2K0YMJFA
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*https://benchling.com/s/seq-NlmhOd0p27Kd2K0YMJFA

Latest revision as of 13:53, 6 March 2020

For the sequence below:

  • Create DNA
  • Annotate promoter (-10/-35 sequences)
  • Analyze rho independent terminator (ARNold)
  • Annotate operator (ttgtgagcggataacaa)
  • Analyze RNA 5’ UTR structure (NUPACK)
  • Annotate 5’ UTR/3’ UTR
  • Locate RBS
  • Locate Start/stop codons

ILocate ORF

pT7lacO-GFP sequence